#!C:\Perl\bin use strict; use warnings; my @beginning = (34, 76); my @ending = (72, 85); my @interdomainatoms = (33, 34, 72, 73, 75, 76, 77, 78); my $jcounter = 0; my $nseg = 1; for (my $iseg = 0; $iseg <= $nseg; $iseg++){ for (my $ires = $beginning[$iseg]; $ires <= $ending[$iseg]; $ires++) { if ($ires == $interdomainatoms[$jcounter]) { print STDOUT $ires; $jcounter++; } } }