Hi Perlmonks.
I'm very confused with regex..:@

The partial of the input file looks like the line below:
>sp|P49929|SC52_SHEEP DITCAEPQSVRGLRRLGRKIAHGVKKYG >gi|1771590|emb|CAA70562.1| temporin B precursor MFTLKKSLLLLFFLGTINLSL +CEEERNAEEERRDEPDERDVQVEKRLLPI

I only want to get first 2 values separated by a |
Output expected:
sp == P49929 gi == 1771592
I try using the regex below:
##$lines contains the string to be matched if(/^>(\w+)\|(.*)?\|.*?$line.*\n/i){ $flag=1; print OUT "$_"; print "$1 == $2\n"; }
It will print
sp == P49929 as expected
gi == 1771592|emb|CAA70564.1 unexpected
Any suggestion??
Thank you in advanced.

In reply to get some part of the string using regex by gdnew

Title:
Use:  <p> text here (a paragraph) </p>
and:  <code> code here </code>
to format your post, it's "PerlMonks-approved HTML":



  • Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
  • Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
  • Read Where should I post X? if you're not absolutely sure you're posting in the right place.
  • Please read these before you post! —
  • Posts may use any of the Perl Monks Approved HTML tags:
    a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
  • You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
            For:     Use:
    & &amp;
    < &lt;
    > &gt;
    [ &#91;
    ] &#93;
  • Link using PerlMonks shortcuts! What shortcuts can I use for linking?
  • See Writeup Formatting Tips and other pages linked from there for more info.