Hi Perlmonks.
I'm very confused with regex..:@
The partial of the input file looks like the line below:
>sp|P49929|SC52_SHEEP
DITCAEPQSVRGLRRLGRKIAHGVKKYG
>gi|1771590|emb|CAA70562.1| temporin B precursor MFTLKKSLLLLFFLGTINLSL
+CEEERNAEEERRDEPDERDVQVEKRLLPI
I only want to get first 2 values separated by a |
Output expected:
sp == P49929
gi == 1771592
I try using the regex below:
##$lines contains the string to be matched
if(/^>(\w+)\|(.*)?\|.*?$line.*\n/i){
$flag=1;
print OUT "$_";
print "$1 == $2\n";
}
It will print
sp == P49929 as expected
gi == 1771592|emb|CAA70564.1 unexpected
Any suggestion??
Thank you in advanced.
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