THANK YOU ALL!

I am happy to say that the problem I had been having is now fixed. I am, however, embarrassed by what was causing the problem. I was careless when my boss asked me to find a region of the contig for her by hand and actually entered notes in the sequence file its self. Being that the file is 551 pages of pure text, I did not remember/notice the additions when I looked at the result of the editcontig() sub to look for problems.

Thanks again to all of you for your help and reminding me to verify anything that I edit before taking for granted that all went as planned.

I have been converted, evangelized even to a believer in the PerlMonk society and will most assuredly be bugging you nice people in the future!

one last thank you and I will end... THANK YOU!

-Augustine


In reply to Re: substr is behaving differently with small vs large strings by wadunn
in thread substr is behaving differently with small vs large strings by wadunn

Title:
Use:  <p> text here (a paragraph) </p>
and:  <code> code here </code>
to format your post, it's "PerlMonks-approved HTML":



  • Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
  • Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
  • Read Where should I post X? if you're not absolutely sure you're posting in the right place.
  • Please read these before you post! —
  • Posts may use any of the Perl Monks Approved HTML tags:
    a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
  • You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
            For:     Use:
    & &amp;
    < &lt;
    > &gt;
    [ &#91;
    ] &#93;
  • Link using PerlMonks shortcuts! What shortcuts can I use for linking?
  • See Writeup Formatting Tips and other pages linked from there for more info.