Hi Experts,

I have a set of ~1GB ASCII files.
In each file, I'd like to search and replace, based on an input table file.
The table file has 2 columns, one for search_string, the other for replace_string
Example of table file entry:
foo bar

I already coded it, but would like some advice.
This code takes 70 minutes on a 1GB ASCII file, with a table file of 600 key/value pairs, running on a HP XW4100 workstation.
Here is the code:
# I have already read the 2-column table file into %table. # I've also already opened INFILE and OUTFILE my @keys_ordered = sort { length $table_ref->{$b} <=> length $table_ref->{$a} } keys %{$table_ref}; # Sorted in reverse order of length, so that longer strings # in the data file are found before shorter strings # Done here to increase speed, vs inside the while loop my $replacecount = 0; while ( my $line = <INFILE> ) { for my $key ( @keys_ordered ) { $replacecount += ( $line =~ s/$key/$table_ref->{$key}/g ); } print OUTFILE $line; } print "Made $replacecount replacements.\n";

This works just fine on a simple set of input data, but I'm worried that this algorithm will have unintended consequences, since it is iterating through every key, even if a replace has already been done on that part of the line.

Suppose that this table file was used:
foo bar
ba BAH

Suppose my input data file contains the line:
"This algorithm is foo"

I want the output data file to become:
"This algorithm is bar"

Instead, the output data file will look like this:
"This algorithm is BAHr"
Since "foo" became "bar", and the next time through the loop "ba" became "BAH"

How can I prevent this from happening?
I cannot limit each line to just one substitution. I need to make multiple substitutions on some lines of my data file.

Thanks,

- Chris Koknat

In reply to Algorithm to search and replace on data file, based on a table file? by koknat

Title:
Use:  <p> text here (a paragraph) </p>
and:  <code> code here </code>
to format your post, it's "PerlMonks-approved HTML":



  • Posts are HTML formatted. Put <p> </p> tags around your paragraphs. Put <code> </code> tags around your code and data!
  • Titles consisting of a single word are discouraged, and in most cases are disallowed outright.
  • Read Where should I post X? if you're not absolutely sure you're posting in the right place.
  • Please read these before you post! —
  • Posts may use any of the Perl Monks Approved HTML tags:
    a, abbr, b, big, blockquote, br, caption, center, col, colgroup, dd, del, details, div, dl, dt, em, font, h1, h2, h3, h4, h5, h6, hr, i, ins, li, ol, p, pre, readmore, small, span, spoiler, strike, strong, sub, summary, sup, table, tbody, td, tfoot, th, thead, tr, tt, u, ul, wbr
  • You may need to use entities for some characters, as follows. (Exception: Within code tags, you can put the characters literally.)
            For:     Use:
    & &amp;
    < &lt;
    > &gt;
    [ &#91;
    ] &#93;
  • Link using PerlMonks shortcuts! What shortcuts can I use for linking?
  • See Writeup Formatting Tips and other pages linked from there for more info.