in reply to similar string matching

I think I need a few more informations.

For SUBSTITUTION: Do I get the part to substitute as a parameter or do I have to guess it (starts with TT and ands with TT or something like this)?

Same question for DELETION: Do I have to guess whats going to be deleted?

How long or better how small may the matching parts at the beginning and the ending be for a successfull return?

Please describe your needs a little more exactly.

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Re^2: similar string matching
by Murcia (Monk) on Jul 05, 2004 at 11:10 UTC
    The successfull return is a good question! It is quite difficult to infine. I want the best values on precision and recall. DELETIONS: I think that minimum 5 amino acid at both end are ok of a sucessfull return. Murcia
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