in reply to calculating length of the string

++Eily,

As you read the file content each line ends with newline character '\n', perl has function chomp() it removes characters at the end of strings corresponding to the $INPUT_LINE_SEPARATOR ($/), When given no arguments, the operation is performed on $_.

use strict; use warnings; my $arr2 = <DATA>; chomp($arr2); print "rna sequence is $arr2\n"; my $len2= length($arr2); print $len2; __DATA__ CUGUACAGCCUCCUAGCUUUCC

All is well. I learn by answering your questions...

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Re^2: calculating length of the string
by locked_user sundialsvc4 (Abbot) on Jul 29, 2015 at 13:09 UTC

    ... and, just to be 100% clear, the bit o’ magick that you would be looking for, in the above code snippet, is the call to chomp().