I tested the code with the following data:
>header1
ATGATCTAGTCGATCGCTAGCTAGATCGCTAGCTG
CATGATCTAGTCGATCGCTAGCTAGATCGCTAGCTGC
>header2
ATGATCTAGTCGATCGCTAGCTAGATCGCTAGCTGC
ATGATCTAGTCGATCGCTAGCTAGATCGCTAGCTGC

[download]
It gives the follwoing output:
>header1        M
>header1        I
>header1        _
>header1        S
>header1        I
>header1        A
>header1        S
>header1        _
>header1        I
>header1        A
>header1        S
>header1        C
>header1        M
>header1        I
>header1        _
>header1        S
>header1        I
>header1        A
>header1        S
>header1        _
>header1        I
>header1        A
>header1        S
>header1        C
>header2        M
>header2        I
>header2        _
>header2        S
>header2        I
>header2        A
>header2        S
>header2        _
>header2        I
>header2        A
>header2        S
>header2        C
>header2        M
>header2        I
>header2        _
>header2        S
>header2        I
>header2        A
>header2        S
>header2        _
>header2        I
>header2        A
>header2        S
>header2        C

[download]
Please, be more specific and explain what you mean by "won't work".
لսႽ† ᥲᥒ⚪⟊Ⴙᘓᖇ Ꮅᘓᖇ⎱ Ⴙᥲ𝇋ƙᘓᖇ

In reply to Re^4: translating multiple DNA sequence to protein sequence by choroba
in thread translating multiple DNA sequence to protein sequence by yuvraj_ghaly

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