A quick search of MetaCPAN turns up a few modules that are happy to deal with FASTA files. The first one I see is Bio::SeqReader::Fasta, which may help you out.

Have a read through these choices, and see if some of the examples help you out.

Alex / talexb / Toronto

Thanks PJ. We owe you so much. Groklaw -- RIP -- 2003 to 2013.

In reply to Re: Trypsin digestion by talexb
in thread Trypsin digestion by BioUs2003

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