I am new to perl.

I am trying to write a simple code to find an ORF (open reading frames)

I am trying to identify the ORF with start(ATG) and stop codons(TAA|TAG|TGA) and print out the ORF.

The nucleotide sequence: 

TTCAGGTGTTTGCAACTGCGTTTTATTGCAAGAAAGAGTGGAGGGGTTTCCATGGGGCCCACCTCACAAC
+CCACTC
TTCACCCCCAAAATCACGCAGGGATCGGACTCAGGAAAGGGAAGCATCTGTGTGTTGCATACGAGCCCTT
+CCTGTACTTACTTCTTTCACAGCAGGGAAGG
AAGAGGGAAGAGGCAGCTGTGGAGAGGATCAGGTTGCGGGAGGTGGGTATCTCGCTGCTCTGACCTTACG
+TACAGTCCTCCACAGAAGCATCAAAGTGGACT
GGCACATATCGGCTCCCTTCACAGGCCACAATCATCTGTCTCTCCTTCGGGCTGGTCCGGTATCCAC

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2018-05-02 Athanasius added code and paragraph tags

In reply to REGEX help by Mike98mm

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