Perhaps this will be fast enough for you:
#!/usr/bin/perl
use warnings;
use strict;
use Fcntl ':seek';
open DATASET_A, '<', 'File_A' or die "Cannot open 'File_A' $!";
open DATASET_B, '<', 'File_B' or die "Cannot open 'File_B' $!";
my %dataB;
my $tell = tell DATASET_B;
while ( <DATASET_B> ) {
if ( /^(\S+)/ ) {
push @{ $dataB{ $1 } }, $tell + length $1;
}
$tell = tell DATASET_B;
}
while ( <DATASET_A> ) {
chomp;
my ( $key ) = /^(\S+)/;
if ( exists $dataB{ $key } ) {
for my $seek ( @{ $dataB{ $key } } ) {
seek DATASET_B, $seek, SEEK_SET;
print $_, scalar <DATASET_B>;
}
}
}
__END__
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