Some things that might have an influence on the benchmarks, depending on the RDBMS:
If you just test for existence, you can use the exists function in a bit of sql-code:
if not exists (select * from depend where usedby='Depend::Module' AND
+uses='DBI')
begin
insert ....
end
An index on the columns in where clause might have a huge impact if you use count(*).
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