There is a big problem with encoding sequences in 2-bit format.
Whilst they occupy 1/4 the space, and are theoretically 4x faster to search, the problem is that computers only compare bytes.
With each byte holding 4 codons, you will only be able to find matches at every fourth position.
In reply to Re: Bit Vector ??
by BrowserUk
in thread Bit Vector ??
by saranrsm
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