distance matrix and tree cluster

jeteve has asked for the wisdom of the Perl Monks concerning the following question:

Hello Wise and Holly monks. I got here a pretty distance matrix between nodes and I'm seeking for a perl mod or a perl-enable library to turn it to an unrooted hierarchical cluster. All I've found till now deals with phylogeny but my concern is more just about data clustering... Thx for any help !

-- Nice photos of naked perl sources here !

Comment on distance matrix and tree cluster

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Re: distance matrix and tree cluster by polypompholyx (Chaplain) on Sep 19, 2005 at 17:22 UTC
I think you're trying to do something with bioinformatic data, but your question is too vague to really help. Have you looked at bioperl?	[reply]
Re^2: distance matrix and tree cluster by jeteve (Pilgrim) on Sep 22, 2005 at 07:46 UTC
I had. I founded this class in the doc: Bio::Tree::DistanceFactory Here: http://bioperl.org/HOWTOs/html/Trees.html But wasn't able to find it in the bioperl distribution: http://search.cpan.org/~birney/bioperl-1.4/ Anyone can help ? I'd looooove to use this DistanceFactory Class !! Thx ! -- Nice photos of naked perl sources here !	[reply]
Re: distance matrix and tree cluster by halley (Prior) on Sep 19, 2005 at 16:47 UTC
How to ask questions the smart way. -- `[ e d @ h a l l e y . c c ]`	[reply]